You searched "Functional subclasses" for the keyword: "Protein-DNA binding".
There are 73 matches.
        
DP00003
Early E2A DNA-binding protein (DNB2_ADE05) (Adenovirus ssDNA binding protein) - Human adenovirus C serotype 5 (HAdV-5)(Human adenovirus 5) - xml - fasta
DP00008
POU domain class 2-associating factor 1 (OBF1_MOUSE) (B-cell-specific coactivator OBF-1) (OCT-binding factor 1) (B-cell-specific coactivator OCA-B) (OCA-B) (B-cell-specific coactivator BOB-1) (BOB-1) - Mus musculus (Mouse) - xml - fasta
DP00020
DNA-binding protein RAP1 (RAP1_YEAST) (SBF-E) (Repressor/activator site-binding protein) (TUF) - Saccharomyces cerevisiae (Baker's yeast) - xml - fasta
DP00030
Glucocorticoid receptor (GCR_HUMAN) (GR) (Nuclear receptor subfamily 3 group C member 1) - Homo sapiens (Human) - xml - fasta
DP00036
Heat shock factor protein (HSF_KLULA) (HSF) (Heat shock transcription factor) (HSTF) - Kluyveromyces lactis (Yeast) (Candida sphaerica) - xml - fasta
DP00038
Non-histone chromosomal protein HMG-14 (HMGN1_BOVIN) (High-mobility group nucleosome-binding domain-containing protein 1) - Bos taurus (Bovine) - xml - fasta
DP00039
Non-histone chromosomal protein HMG-17 (HMGN2_HUMAN) (High-mobility group 17) (High-mobility group nucleosome-binding domain-containing protein 2) (High-mobility group nucleosomal binding domain 2) (High-mobility group protein N2) (HMGN2) - Homo sapiens (Human) - xml - fasta
DP00040
High mobility group protein HMG-I/HMG-Y (HMGA1_HUMAN) (HMG-I(Y)) (High mobility group A non-histone chromosomal proteins) (High mobility group AT-hook protein 1) (High mobility group protein A1) (High mobility group protein R) - Homo sapiens (Human) - xml - fasta
DP00041
High mobility group-T protein (HMGT_ONCMY) (HMG-T) (HMG-T1) (HMG-1) - Oncorhynchus mykiss (Rainbow trout)(Salmo gairdneri) - xml - fasta
DP00042
Non-histone chromosomal protein H6 (H6_ONCMY) (Histone T) (High mobility group H6) (Oncorhyncin-3 [cleavage product 1]) (Oncorhyncin III) - Oncorhynchus mykiss (Rainbow trout)(Salmo gairdneri) - xml - fasta
DP00044
Histone H5 (H5_CHICK) - Gallus gallus (Chicken) - xml - fasta
DP00046
Lymphoid enhancer-binding factor 1 (LEF1_RAT) (LEF-1) - Rattus norvegicus (Rat) - xml - fasta
DP00049
Myelin transcription factor 1-like protein (MYT1L_RAT) (MyT1L protein) (Neural zinc finger factor 1) (NZF-1) - Rattus norvegicus (Rat) - xml - fasta
DP00057
Sperm histone (HSP1_CHICK) (Protamine) (Galline) - Gallus gallus (Chicken) - xml - fasta
DP00060
Modification methylase PvuII (MTP2_PROVU) (M.PvuII) (N-4 cytosine-specific methyltransferase PvuII) (N(4)-cytosine-specific DNA methylase) (EC 2.1.1.113) - Proteus vulgaris - xml - fasta
DP00061
Replication protein A 70 kDa DNA-binding subunit (RFA1_HUMAN) (RP-A p70) (Replication factor A protein 1) (RF-A protein 1) (Single-stranded DNA-binding protein) - Homo sapiens (Human) - xml - fasta
DP00062
Retinoic acid receptor RXR-alpha (RXRA_HUMAN) (Retinoid X receptor alpha) (Nuclear receptor subfamily 2 group B member 1) - Homo sapiens (Human) - xml - fasta
DP00071
Homeobox protein Nkx-2.1 (NKX21_RAT) (Thyroid transcription factor 1) (TTF-1) (Thyroid nuclear factor 1) - Rattus norvegicus (Rat) - xml - fasta
DP00074
Estrogen receptor [Isoform long] (ESR1_HUMAN) (ER) (Estradiol receptor) (Estrogen receptor alpha) (ER-alpha) (Nuclear receptor subfamily 3 group A member 1) - Homo sapiens (Human) - xml - fasta
DP00077
Regulatory protein ADR1 (ADR1_YEAST) (Transcription factor ADR1) - Saccharomyces cerevisiae (Baker's yeast) - xml - fasta
DP00083
General control protein GCN4 (GCN4_YEAST) (Amino acid biosynthesis regulatory protein) (Transcription factor GCN4) - Saccharomyces cerevisiae (Baker's yeast) - xml - fasta
DP00084
Protein max [Isoform 1] (MAX_HUMAN) (Myc-associated factor X) (p21 Max) - Homo sapiens (Human) - xml - fasta
DP00087
Tegument protein VP16 (VP16_HHV2H) (Alpha trans-inducing protein) (Alpha-TIF) (Vmw65) (ICP25) (Transcriptional activator VP16) - Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) - xml - fasta
DP00097
Histone H1.0 (H10_MOUSE) (Histone H1(0)) (Histone H1') (MyD196) (H1 histone family, member 0) - Mus musculus (Mouse) - xml - fasta
DP00103
Protein grpE (GRPE_ECOLI) (HSP-70 cofactor) (Heat shock protein B25.3) (HSP24) - Escherichia coli (strain K12) - xml - fasta
DP00111
Protein C-ets-1 (ETS1_MOUSE) (p54) - Mus musculus (Mouse) - xml - fasta
DP00136
Histone H1.2 (H12_RAT) (H1d) - Rattus norvegicus (Rat) - xml - fasta
DP00152
DNA repair protein XRCC4 (XRCC4_HUMAN) (X-ray repair cross-complementing protein 4) - Homo sapiens (Human) - xml - fasta
DP00172
POU domain class 2-associating factor 1 (OBF1_HUMAN) (B-cell-specific coactivator OBF-1) (OCT-binding factor 1) (OBF-1) (BOB-1) (OCA-B) - Homo sapiens (Human) - xml - fasta
DP00195
Non-histone chromosomal protein HMG-17 (HMGN2_BOVIN) (High-mobility group nucleosome-binding domain-containing protein 2) (HMG-17) - Bos taurus (Bovine) - xml - fasta
DP00224
Transcription factor 4 (ITF2_HUMAN) (Immunoglobulin transcription factor 2) (ITF-2) (SL3-3 enhancer factor 2) (SEF-2) - Homo sapiens (Human) - xml - fasta
DP00270
Fab DNA-1 (Antigen binding fragment DNA-1) (anti-ssDNA Fab DNA-1) - Mus musculus (Mouse) - xml - fasta
DP00288
Prevent host death protein (PHD_BPP1) (Phd) - Enterobacteria phage P1 (Bacteriophage P1) - xml - fasta
DP00291
Calsenilin [Isoform 1] (CSEN_MOUSE) (Kv channel-interacting protein 3) (KChIP3) (A-type potassium channel modulatory protein 3) (DRE-antagonist modulator) (DREAM) - Mus musculus (Mouse) - xml - fasta
DP00328
Transcription factor GAGA [Isoform B] (GAGA_DROME) (Trithorax-like protein) (GAGA factor) (GAF) (Adh transcription factor 2) (Neural conserved at 70F) - Drosophila melanogaster (Fruit fly) - xml - fasta
DP00375
Endonuclease VIII (END8_ECOLI) (DNA glycosylase/AP lyase Nei) (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase Nei) - Escherichia coli - xml - fasta
DP00384
High mobility group protein B1 (HMGB1_MOUSE) (High mobility group protein 1) (HMG-1) - Mus musculus (Mouse) - xml - fasta
DP00423
Histone H1 (H1_YEAST) (Hho1p) - Saccharomyces cerevisiae (Baker's yeast) - xml - fasta
DP00432
Non-histone chromosomal protein 6A (NHP6A_YEAST) - Saccharomyces cerevisiae (Baker's yeast) - xml - fasta
DP00433
Lactose operon repressor (LACI_ECOLI) (Lac repressor) - Escherichia coli - xml - fasta
DP00437
DNA repair protein RAD52 homolog (RAD52_HUMAN) - Homo sapiens (Human) - xml - fasta
DP00469
Transcription factor HY5 (HY5_ARATH) (Protein LONG HYPOCOTYL 5) (bZIP transcription factor 56) (AtbZIP56) - Arabidopsis thaliana (Mouse-ear cress) - xml - fasta
DP00470
Opaque 2 (Q39532_COILA) (O2) - Coix lachryma-jobi (Job's tears) - xml - fasta
DP00492
Androgen receptor [Isoform 1 (AR-B)] (ANDR_HUMAN) (Dihydrotestosterone receptor) (Nuclear receptor subfamily 3 group C member 4) - Homo sapiens (Human) - xml - fasta
DP00500
DNA repair enzyme (Q8MWS6_TOXGO) (TgDRE) - Toxoplasma gondii - xml - fasta
DP00510
Nuclear protein 1 (NUPR1_HUMAN) (Protein p8) (Candidate of metastasis 1) - Homo sapiens (Human) - xml - fasta
DP00521
Securin (PTTG1_HUMAN) (Pituitary tumor-transforming gene 1 protein) (hPTTG) (Tumor-transforming protein 1) (Esp1-associated protein) - Homo sapiens (Human) - xml - fasta
DP00531
Abscisic stress-ripening protein 1 (ASR1_SOLLC) - Solanum lycopersicum (Tomato) (Lycopersicon esculentum) - xml - fasta
DP00533
Regulatory protein SIR3 (SIR3_YEAST) (Silent information regulator 3) - Saccharomyces cerevisiae (Baker's yeast) - xml - fasta
DP00539
Methyl-CpG-binding protein 2 [Isoform A (Beta)] (MECP2_HUMAN) (MeCp-2 protein) (MeCp2) (hMeCp2) - Homo sapiens (Human) - xml - fasta
DP00544
Protein LLP (LLPH_APLKU) (Protein LAPS18-like) - Aplysia kurodai (Kuroda's sea hare) - xml - fasta
DP00568
Paired box 6 (Q66SS1_HUMAN) (Paired box gene 6 isoform a) - Homo sapiens (Human) - xml - fasta
DP00574
Serum response factor (SRF_HUMAN) (SRF) - Homo sapiens (Human) - xml - fasta
DP00626
Protein umuD (UMUD_ECOLI) (Protein umuD' [cleavage product 1]) - Escherichia coli (strain K12) - xml - fasta
DP00626_C001
Protein umuD' [cleavage product 1] (UMUD_ECOLI) - Escherichia coli (strain K12) - xml - fasta
DP00629
Nucleoprotein (NCAP_SENDF) (Nucleocapsid protein) (NP) (Protein N) - Sendai virus (strain Fushimi)(SeV) - xml - fasta
DP00651_C007
Integrase p46 (POL_MLVMO) ([cleavage product of Gag-Pol polyprotein]) (Integrase p46 [cleavage product 7]) (IN) - Moloney murine leukemia virus (MoMLV) - xml - fasta
DP00656
Transcriptional repressor protein korB (KORB2_ECOLX) (korB) - - xml - fasta
DP00659
Telomere-binding protein subunit beta (TEBB_OXYNO) (Telomere-binding protein 41 kDa subunit) (TEBP beta) - Oxytricha nova - xml - fasta
DP00672
Neurogenin-1 (NGN1_HUMAN) (Neurogenic differentiation factor 3) (Neurogenic basic-helix-loop-helix protein) (NeuroD3) - Homo sapiens (Human) - xml - fasta
DP00683
Homeobox protein Nkx-3.1 (NKX31_HUMAN) (Homeobox protein NK-3 homolog A) - Homo sapiens (Human) - xml - fasta
DP00684
DNA helicase II (UVRD_ECOLI) (DNA helicase II) - Escherichia coli (strain K12) - xml - fasta
DP00691
Regulator of chromosome condensation (RCC1_HUMAN) (RCC1) (Chromosome condensation protein 1) (Cell cycle regulatory protein) - Homo sapiens (Human) - xml - fasta
DP00694
RING1 and YY1-binding protein (RYBP_HUMAN) (Death effector domain-associated factor) (YY1 and E4TF1-associated factor 1) (Apoptin-associating protein 1) (APAP-1) (DED-associated factor) - Homo sapiens (Human) - xml - fasta
DP00711
Lysine-specific demethylase 5B (KDM5B_MOUSE) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1) - Mus musculus (Mouse) - xml - fasta
DP00712
Lysine-specific demethylase 5B (KDM5B_HUMAN) (Cancer/testis antigen 31) (Histone demethylase JARID1B) (Jumonji/ARID domain-containing protein 1B) (PLU-1) (Retinoblastoma-binding protein 2 homolog 1) (CT31) (RBP2-H1) - Homo sapiens (Human) - xml - fasta
DP00713
Lysine-specific demethylase 5A (KDM5A_HUMAN) (Histone demethylase JARID1A) (Jumonji/ARID domain-containing protein 1A) (Retinoblastoma-binding protein 2) (RBBP-2) - Homo sapiens (Human) - xml - fasta
DP00716_C001
Lamin A/C (LMNA_HUMAN) (cleavage product 1 of Prelamin-A/C) (70 kDa lamin) (Renal carcinoma antigen NY-REN-32) (Lamin C is Isoform P02545-2) - Homo sapiens (Human) - xml - fasta
DP00718_A001
Peroxisome proliferator-activated receptor gamma (Isoform 1) (PPARG_HUMAN) (Nuclear receptor subfamily 1 group C member 3) (PPAR-gamma (Isoform 1)) ((Isoform 2 is UniProt canonical)) - Homo sapiens (Human) - xml - fasta
DP00719
G/T mismatch-specific thymine DNA glycosylase (TDG_HUMAN) (Thymine-DNA glycosylase) (TDG) - Homo sapiens (Human) - xml - fasta
DP00720
FACT complex subunit Ssrp1 (SSRP1_DROME) (Chorion-factor 5) (Facilitates chromatin transcription complex subunit Ssrp1) (Recombination signal sequence recognition protein) (Single-strand recognition protein) (dSSRP1) - Drosophila melanogaster (Fruit fly) - xml - fasta
DP00722
Single-stranded DNA-binding protein (SSB_ECO57) (Helix-destabilizing protein) (SSB) - Escherichia coli O157:H7 - xml - fasta
DP00741
Regulatory protein cro (RCRO_LAMBD) (lambda Cro) - Enterobacteria phage lambda - xml - fasta


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